Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941951.1_cds_XP_016485625.1_76534
CDS Infomation

[gene=LOC107806026] [db_xref=GeneID:107806026] [protein=galacturonosyltransferase 8-like] [partial=3'] [protein_id=XP_016485625.1] [location=join(8325..8501,9353..10594,11394..>11534)] [gbkey=CDS]
Sequence

ATGGCTCTCCGGAGCTCCTACCGAACTCCATTTTCCGATCGGAGCATCGCCGTTTCCGGC
ACCGGAATTCGGCTCACGTTCAAGCTCTTCGCCTCTTTTCTCTCTGTCGCTGTTTTCCTT
TTATTAGCTCTCTCTTTCCTCTTCACTTCCTCCTCCGATCCCTCCGATCTCTCCGTCGGA
AATTCACATGATTTATATAGAGGTGGACTACGAAGGTCTGTTTTAGCTTTGAAATCCGAT
CCATTGAAGCCGAGGCTTGATCAGATTAAGAAGCAAGCAGATGATCACCGTGCATTGGCT
CTAGCTTATGCTTCCTATGCTCGGAAGCTGAAGCTCGAGAACTCAAAGCTCGTTCGAGTT
TTTGCTGAGTTATCTAGGAACTTTACAGATCTGATTTCAAAACCTTCATACCGCACACTA
TTTGATTCAGATGGGAACTCTATGAACGAGCCGGTGCTTAGGCAGTTTGAGAAAGAGGTG
AAGGAACGGATTAAAGTCACGCGACAAGTTGTTGCTGAGGCAAAAGAGTCATTTGATAAT
CAATTAAAGATTCAGAAGCTGAAAGACACAATTTTTGCTGTCAATGAACAGCTAACGAAG
GCGAAGAAGCAAGGTGCTTTCTCGAGCTTGATTGCTGCAAAGTCTATCCCAAAGAGCGTG
CATTGTTTGGCAATGAAGTTAATGGAAGAGCGAATAGCTCATCCAGATAAGTATACTGAT
GATAGGAATACTCCACCAGAATTCGAGGATCCTAATCTTTATCATTATGCAATTTTCTCT
GACAATGTGCTTGCTGCTTCAGTTGTGGTGAATTCGGCTGTTAAACACTCAAAAGACCCA
TCGAAGCATGTATTTCATGTGGTGACCGATAAAATGAATCTTGGGGCTATGCAAGTTATG
TTCAAGATGAAAGATTATAATGGGGCTTTTATTGAAGTGAAGTCAGTCGAGGATTATAAG
TTCCTGAATTCTTCTTATGTTCCAGTTCTTAAACAGCTTGAATCTGCAAAACTTCAGCAG
TTTTACTTTGAGAATAAGCTCGAGAATGCAACAAAGGATACAACTAATATGAAATTCAGG
AACCCGAAGTATCTCTCAATATTGAACCACATTAGATTCTATTTACCAGAATTGTACCCC
AAGTTGCACAGGATATTGTTCTTGGACGATGATATAGTTGTTCAGAAGGATTTGACAGGT
CTATGGAAGATAGATATGGATGGTAAGGTGAATGGAGCTGTGGAGACATGTTTTGGTTCA
TTCCATCGTTATGCACAATACATGAATTTCTCACATCCTTTGATCAAGGAGAAGTTCAAC
CCCAAAGCTTGTGCATGGGCTTACGGAATGAACTTCTTTGACTTGGATGCTTGGAGGAGG
GAGAAGCTCACTGAGGAATACCATTACTGGCAGAGTCTGAACGAAAACCGAACCTTATGG
AAATTGGGTACACTTCCTCCTGGTTTAATCACATTTTATTCTACTACGAAGCCACTTGAC
AAATCTTGGCATGTGTTGGGGCTTGGCTACAATCCAAGCATAAGCATGGATGAGATCAAT

Peptide Sequence

PEP ID

XP_016485625.1
PEP Infomation

PREDICTED: galacturonosyltransferase 8-like, partial [Nicotiana tabacum]
Sequence

MALRSSYRTPFSDRSIAVSGTGIRLTFKLFASFLSVAVFLLLALSFLFTSSSDPSDLSVG
NSHDLYRGGLRRSVLALKSDPLKPRLDQIKKQADDHRALALAYASYARKLKLENSKLVRV
FAELSRNFTDLISKPSYRTLFDSDGNSMNEPVLRQFEKEVKERIKVTRQVVAEAKESFDN
QLKIQKLKDTIFAVNEQLTKAKKQGAFSSLIAAKSIPKSVHCLAMKLMEERIAHPDKYTD
DRNTPPEFEDPNLYHYAIFSDNVLAASVVVNSAVKHSKDPSKHVFHVVTDKMNLGAMQVM
FKMKDYNGAFIEVKSVEDYKFLNSSYVPVLKQLESAKLQQFYFENKLENATKDTTNMKFR
NPKYLSILNHIRFYLPELYPKLHRILFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFGS
FHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKLTEEYHYWQSLNENRTLW
KLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIN

Transcript Sequence

Gene sequence data has not been registered.